User: Erika

gravatar for Erika
Erika100
Reputation:
100
Status:
New User
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Last seen:
11 years, 6 months ago
Joined:
11 years, 11 months ago
Email:
k***@bx.psu.edu

Posts by Erika

<prev • 10 results • page 1 of 1 • next >
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Fetch Sequence And Alignments: Extract Blastz Alignments
... Is it possible to get hg18 alignments to panTro2 on the server? the latest are at : http://hgdownload.cse.ucsc.edu/goldenPath/hg18/vsPanTro2/ please do NOT use the ones currently in /depot/data1/cache/human/hg18/align/panTro2/axtNet/ as they were run using an incorrect substitution matrix. Tha ...
written 11.5 years ago by Erika100
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Tools: Operate On Genomic Intervals: Merge
... Dear Galaxy Help, I was wondering if it would be possible to get the coordinates that caused the merge as the output from "Tools: Operate on Genomic Intervals: Merge the overlapping intervals of a query", rather than the entire merged interval as the output. Kind of like the output from "Intersect ...
galaxy written 11.7 years ago by Erika100 • updated 11.7 years ago by Ian Schenck40
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History Has 100 Jobs I Did Not Process/Do Not Recognize
... hi, i was using galaxy earlier today. i came back from maybe 2hrs break and now my history has about 100 jobs i do not recognize. and i do not see my jobs in this list. unfortunately, i was not logged on as a user. this is the link i get if i click on "history options: share current history". i ...
galaxy written 11.7 years ago by Erika100
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Edit Attributes Is Not Saving Changes
... Hi, I'm trying to use the "edit attributes" function and the server is returning a notice indicating "attributes changed" however the attributes changes are not actually being saved. i am specifying a file as "genomic intervals" and i input the columns indicating chromosome, start, end, strand. it ...
written 11.7 years ago by Erika100
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Fwd: Tools: Merge Regions Of A Single Query
... Date: September 27, 2006 5:58:47 PM EDT To: galaxy-user@bx.psu.edu Subject: tools: merge regions of a single query Hi, I've tried using the "Operate on Genomic Intervals" tool called "Merge regions of a single query" with some puzzling results. So from the example provided with the tool it seems ...
galaxy written 11.7 years ago by Erika100
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Tools: Merge Regions Of A Single Query
... Hi, I've tried using the "Operate on Genomic Intervals" tool called "Merge regions of a single query" with some puzzling results. So from the example provided with the tool it seems that if regions fail to merge (i.e. they are unique) then they should be returned in the output along with the merged ...
written 11.7 years ago by Erika100 • updated 11.7 years ago by Ian Schenck40
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Fail To Load Galaxy: Test.G2.Bx.Psu
... i get this error: Internal Server Error i'm trying to load these pages: http://test.g2.bx.psu.edu/display?id=27069 http://test.g2.bx.psu.edu/display?id=27099 thanks! ********************************************************** E.M. Kvikstad Academic Computing Fellow IGDP Genetics Center for ...
written 11.8 years ago by Erika100 • updated 11.8 years ago by Dan Blankenberg130
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Galaxy 2.2 Won'T Load
... Hi, I'm having trouble loading the galaxy main page http:// main.g2.bx.psu.edu/ from Mueller Bldg. I was successfully using galaxy2.2 and first had trouble yesterday afternoon, Tuesday August 29. The browser won't refresh or load the page. I tried using Safari 2.0.4 and internet explorer 5.2.3. ...
galaxy written 11.8 years ago by Erika100 • updated 11.8 years ago by Yi Zhang90
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Describe Table Schema
... Tools: Get data: UCSC Main table browser: when you click on "describe table schema" button, rather than getting the description of the table you get a message saying: "This is a proxy to the data services provided by the UCSC Genome Browser's Table Browser." any chance we can get the table descript ...
written 11.9 years ago by Erika100
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Galaxy Page Load Failure
... Hi, Yogeshwar and I in Kateryna Makova's lab have both had trouble loading the galaxy main page http://main.g2.bx.psu.edu/ from Mueller Bldg. I was successfully using galaxy2.2 and first had trouble yesterday afternoon, Thursday July 27. The browser won't refresh or load the page. I tried using S ...
galaxy written 11.9 years ago by Erika100 • updated 11.9 years ago by Anton Nekrutenko1.7k

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