User: Ali

gravatar for Ali
Ali20
Reputation:
20
Status:
New User
Location:
United States
Last seen:
9 hours ago
Joined:
3 years, 11 months ago
Email:
a*********@hotmail.com

Posts by Ali

<prev • 7 results • page 1 of 1 • next >
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Comment: C: "Count.seqs" not running
... Yes I am working at https://usegalaxy.org ...
written 10 months ago by Ali20
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Comment: C: "Count.seqs" not running
... Hi Jennifer, All input data are fine, I tried count.seqs with the 16 Microbial Analysis with Mothur demo and it seemed to give this error as well! Thanks for your help, Ali ...
written 10 months ago by Ali20
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Answer: A: Mothur not working
... Thanks Jennifer! it is working fine now. ...
written 10 months ago by Ali20
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"Count.seqs" not running
... Hello, I am getting this error "TERM environment variable not set" when running toolshed.g2.bx.psu.edu/repos/iuc/mothur_count_seqs/mothur_count_seqs/1.36.1.0. I appreciate your help, Best, Ali ...
usegalaxy.org software error mothur written 10 months ago by Ali20 • updated 11 weeks ago by genevieve.laperriere0
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Mothur not working
... Dear All In Mothur when doing make.contigs I am getting the below error: 'Fatal error: Exit code 127 () mothur: error while loading shared libraries: libboost_iostreams.so.1.57.0: cannot open shared object file: No such file or directory' Any clues why it is happening? Thanks for your help, Ali ...
galaxy written 10 months ago by Ali20
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Cuffdiff significant genes
... I am new to RNA-seq analysis and wanted to know what is the best approach to filter out significant genes from the cuffdiff output. The issue I have is I don't have replicates so my understanding I can't use p-values, would it be enough to just rely on the log2 fold change? I appreciate your help. ...
cuffdiff rna-seq written 3.8 years ago by Ali20
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Metagenomic Analysis and Megablast
... Hi, I am using the windshield splatter workflow to analyse my amplicons, However Galaxy Megablast can not handle Miseq PE reads due to the large nb of reads compared to 454. I appreciate if someone would suggest to me how it can be dealt with. 1- Doing local Megablast would still take huge amount ...
megablast written 4.0 years ago by Ali20 • updated 3.9 years ago by Jennifer Hillman Jackson25k

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Popular Question 4 months ago, created a question with more than 1,000 views. For Cuffdiff significant genes
Popular Question 2.2 years ago, created a question with more than 1,000 views. For Cuffdiff significant genes

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