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Posts by theresa
Cufflinks tool locally cached 'hg38' malformed; error reads: 'An invalid option was selected for index, u'hg38', please verify'
... Greetings, I am trying to use the Cufflinks tool in the main/public instance of Galaxy to generate FPKMs for my BAM files against hg38. The tool throws an error having to do with the locally cached hg38 reference. Below I include the steps to reproduce the error with BAM files aligned to hg38. ...
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