User: jling

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jling70
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Location:
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Joined:
4 years, 1 month ago
Email:
j****@jhu.edu

Posts by jling

<prev • 26 results • page 1 of 3 • next >
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Comment: C: Account over quota but deleted everything
... Thanks Jen, I actually did log out and log back in several times but it didn't change anything. Anyways, thanks again! ...
written 7 weeks ago by jling70
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Account over quota but deleted everything
... Hi, I'm logged out and followed all the instructions here: https://galaxyproject.org/support/account-quotas/ But my account is still over quota. I believe this was caused by fastq-dump. Can you help me reset my account usage? Thanks! ...
quota account quota written 7 weeks ago by jling70 • updated 7 weeks ago by Jennifer Hillman Jackson25k
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Answer: A: Jobs failing due to Disk quota exceeded; only using 40% of 250Gb however
... Nevermind, jobs are running now; appears to be fixed ...
written 15 months ago by jling70
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Jobs failing due to Disk quota exceeded; only using 40% of 250Gb however
... Hi, It seems that I am unable to run any jobs due to "IOError: [Errno 122] Disk quota exceeded" Looks like it's the common error across multiple bug reports. However, I'm only using 40% of 250Gb Could someone look into this? Thanks ...
disk quota exceeded written 15 months ago by jling70
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Comment: C: Reset Galaxy usage
... Ok sure. I actually tried that but maybe I was still logged in on a different computer. Nevertheless, thanks again ...
written 18 months ago by jling70
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Reset Galaxy usage
... Hi, Could someone help me reset my disk usage? I think there's a bug with deleted paused datasets still completing and counting towards disk usage. Thanks ...
disk usage written 18 months ago by jling70 • updated 18 months ago by Jennifer Hillman Jackson25k
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Answer: A: fastq.gz file downloaded from SRA
... Make sure the 'Datatype' is set to fastq.gz You can then 'Convert Format' from fastq.gz to fastq. That's how I've been unzipping ...
written 19 months ago by jling70
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Comment: C: How to unzip the fastq files to be used in Tophat?
... Click 'Edit Attributes', on the top click 'Convert Format' and select convert fastq.gz to fastq Tophat only takes fastqsanger for some reason so you have to change the datatype afterwards from fastq to fastqsanger ...
written 19 months ago by jling70
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Comment: C: Disk Usage, NCBI SRA Tools > Extract Reads fails to delete permanently
... Thank you very much. ...
written 19 months ago by jling70
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Answer: A: How to unzip the fastq files to be used in Tophat?
... Make sure your 'Datatype' is fastq.gz Then go to 'Convert Format' and convert it from fastq.gz to fastqsanger ...
written 19 months ago by jling70

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