Moderator: Nate Coraor

gravatar for Nate Coraor
Nate Coraor3.0k
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Last seen:
2 days, 17 hours ago
Joined:
11 years, 1 month ago
Email:
n***@bx.psu.edu

Posts by Nate Coraor

<prev • 307 results • page 1 of 31 • next >
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Comment: C: FTP upload Filezilla TLS error
... But it fails if you make the same connection to the same host on port 21? ...
written 6 days ago by Nate Coraor3.0k
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Comment: C: FTP upload Filezilla TLS error
... No hits in the logs, but as configured they are not very verbose. Can you point your (passive mode) client at galaxy-web-06.galaxyproject.org port 30921? I've started up a debugging server there that should hopefully reveal the issue. ...
written 6 days ago by Nate Coraor3.0k
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Comment: C: FTP upload Filezilla TLS error
... Can you send me the IP address you're connecting from so I can check our logs? I suspect either the protocol (TLS 1.1+) or available ciphers are not compatible between client and server. nate@bx.psu.edu ...
written 8 days ago by Nate Coraor3.0k
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Answer: A: FTP Server Uploading Problem
... No changes recently, performance can vary somewhat with load but should not be as bad as described. I was just able to upload a 1.5 GB file from my desktop at 50 MB/s. Are you testing from work and from home using the same computer, or different ones? ...
written 11 weeks ago by Nate Coraor3.0k
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Answer: A: Trinity still not running
... Trinity jobs should be moving again. Sorry about the hold up. ...
written 3 months ago by Nate Coraor3.0k
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Answer: A: Trinity run failed at start- please help
... Hi Gia, This looks like a filesystem problem on [Bridges][1], where Trinity runs. Could you try the job again and let us know if it encounters the same error please? Thanks, --nate [1]: https://www.psc.edu/bridges ...
written 3 months ago by Nate Coraor3.0k
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Answer: A: Gradual Loss of Connection to Galaxy
... We've been investigating some issues that could be related to this for the past week. Has it gotten any better in the last 2 days? When it happens, could you open your browser's developer tools and note any error messages that appear in the console there? ...
written 5 months ago by Nate Coraor3.0k
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Answer: A: Tunnel qsub commands
... Hi Manuel, I'd suggest you take a look at the CLI job runner. It is documented in job_conf.xml.sample_advanced and is designed to do exactly what you're looking to do here. ...
written 6 months ago by Nate Coraor3.0k
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Comment: C: ImportError: No module named bigbed_file
... Thanks for posting all of this, it's very informative. What's interesting here is that pip is not downloading the prebuilt binary wheels on wheels.galaxyproject.org, which is why you're having to go through all the trouble of installing all the dependencies of building them from source. What versio ...
written 7 months ago by Nate Coraor3.0k
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Comment: C: ImportError: No module named bigbed_file
... What version of pip are you using? ...
written 7 months ago by Nate Coraor3.0k

Latest awards to Nate Coraor

Scholar 6 months ago, created an answer that has been accepted. For A: Tunnel qsub commands
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Errors at http://usegalaxy.org - Follow for details and updates
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: Errors at http://usegalaxy.org - Follow for details and updates
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: DynamicDisplayApplicationBuilder error after updating Galaxy to latest_2014.10.0
Popular Question 23 months ago, created a question with more than 1,000 views. For Upload To Galaxy Via Ftp
Scholar 2.7 years ago, created an answer that has been accepted. For A: DynamicDisplayApplicationBuilder error after updating Galaxy to latest_2014.10.0
Teacher 2.8 years ago, created an answer with at least 3 up-votes. For A: When will stampede be accessible through galaxy main?
Scholar 2.9 years ago, created an answer that has been accepted. For A: When will stampede be accessible through galaxy main?
Teacher 2.9 years ago, created an answer with at least 3 up-votes. For A: When will stampede be accessible through galaxy main?
Teacher 3.2 years ago, created an answer with at least 3 up-votes. For A: Galaxy 101: The first thing you should try do not work...
Centurion 3.4 years ago, created 100 posts.

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