User: mmccra4

gravatar for mmccra4
mmccra410
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10
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New User
Location:
United States
Last seen:
3 years, 2 months ago
Joined:
4 years ago
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m******@gmail.com

Posts by mmccra4

<prev • 5 results • page 1 of 1 • next >
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Comment: C: Cufflinks assembled transcripts (format gtf) returns "empty" file; why?
... Hello again, Thanks so much for the quick reply.  I will follow your advise in investigating this file.   Also, could you please tell me how to access the long reply you mentioned above, or possibly resend it? If it was an email to me, I did not receive it.  Thanks again for all of your help.   ...
written 3.2 years ago by mmccra410
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Comment: C: Cufflinks assembled transcripts (format gtf) returns "empty" file; why?
... Hey guys, it's been nine months without a reply. What gives? ...
written 3.2 years ago by mmccra410
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Comment: C: Cufflinks assembled transcripts (format gtf) returns "empty" file; why?
... Hey just checking back in... I emailed the share link to the bug address on July 1, but I haven't heard anything back yet. Can you verify for me if the email was received? Thanks much, --Michael ...
written 3.9 years ago by mmccra410
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Comment: C: Cufflinks assembled transcripts (format gtf) returns "empty" file; why?
... I am using http://usegalaxy.org ...
written 4.0 years ago by mmccra410
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Cufflinks assembled transcripts (format gtf) returns "empty" file; why?
... I have three separate .bam files created in the Ion Torrent Suite, all aligned to the same genome file.  I ran Cufflinks v0.0.7 on all three files with default parameters in Galaxy. One of the files is 16.9GB and cufflinks returned an assembled transcripts file with ~120,000 lines.  The second file ...
cufflinks gtf rna-seq written 4.0 years ago by mmccra410 • updated 4.0 years ago by Jennifer Hillman Jackson25k

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