User: macksm

gravatar for macksm
macksm10
Reputation:
10
Status:
New User
Location:
United States
Last seen:
3 years, 7 months ago
Joined:
3 years, 7 months ago
Email:
m*****@email.wofford.edu

Posts by macksm

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answer
745
views
1
answers
Comment: C: Non-compatible file format for SAM tools Filter Pileup
... Hi, Sorry I wasn't specific enough -- The original question about the compatibility of the file was solved with your response when I was able to change the format to pile up. We ran the "Filter Pileup" step, but when it was completed, it said that the data file was empty and would not allow us to v ...
written 3.6 years ago by macksm10
0
votes
1
answer
745
views
1
answers
Comment: C: Non-compatible file format for SAM tools Filter Pileup
... Now that the filter step has completed, it says that it is an empty data file. Could you possibly send me the history that you mentioned above so that I can compare steps? Thanks so much.   ...
written 3.6 years ago by macksm10
0
votes
1
answer
745
views
1
answers
Comment: C: Non-compatible file format for SAM tools Filter Pileup
... This worked! Thank you so much for the fast reply. Savannah ...
written 3.6 years ago by macksm10
0
votes
1
answer
745
views
1
answer
Non-compatible file format for SAM tools Filter Pileup
... Hi, We are attempting to do a paired end mapping and have been following the instructions that we found in one of the vimeo videos titled "qk12". So far everything has been going well, however we just completed the step to Generate a pileup and now for some reason it is not allowing us to filter th ...
samtools rna-seq written 3.6 years ago by macksm10 • updated 3.6 years ago by Jennifer Hillman Jackson23k
2
votes
1
answer
1.0k
views
1
answer
Need help with "Bowtie2" tool
... Hi, is there a way to upload our own reference genome?   Tool name: Bowtie2 Tool version: 0.2 Tool ID: toolshed.g2.bx.psu.edu/repos/devteam/bowtie2/bowtie2/0.2 ToolShed URL: http://toolshed.g2.bx.psu.edu/view/devteam/bowtie2   ...
custom bowtie2 genome reference written 3.6 years ago by macksm10 • updated 3.6 years ago by Martin Čech ♦♦ 4.3k

Latest awards to macksm

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 94 users visited in the last hour