User: Keith Giles

gravatar for Keith Giles
Keith Giles50
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50
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6 years, 9 months ago
Joined:
8 years, 2 months ago
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k**********@gmail.com

Posts by Keith Giles

<prev • 5 results • page 1 of 1 • next >
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Macs
... To add to my post, I reread the macs documentation and it seems that the fdr is calculated based on the p value of negative peaks, regardless of their location. That is to say, a strong peak on one chromosome could be associated with a high fdr bc of an even stronger negative peak, anywhere in the g ...
macs written 6.8 years ago by Keith Giles50 • updated 6.7 years ago by Jennifer Hillman Jackson25k
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Fastq Uploads
... I converted 2 fastq datasets, roughly 3 gb in size each. They have been queued up for about 24 hours now. Are they too big? What is the best way to upload large fastq datasets? Sent from my iPhone ...
written 7.0 years ago by Keith Giles50 • updated 7.0 years ago by Anton Nekrutenko1.7k
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Bed To Gff
... I am trying to use the galaxy "BED to GFF" function. The operation worked, but instead of giving me back any feature information (e.g., exon, intron, repeat, etc.); I just received back the sequence of the interval contained within the BED file. Does anyone know what I'm doing wrong? Moreover, doe ...
gff written 7.2 years ago by Keith Giles50 • updated 7.2 years ago by Jennifer Hillman Jackson25k
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Server Error
... I'm getting a server error for every operation that I'm trying. Its telling me to turn on "debug" to see what the problem is, but I can't find where to do that. Is anyone else having (or have had) this problem? ...
written 8.1 years ago by Keith Giles50
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Uploading Gz Files
... I am unable to load the raw alignment data from the broad institute datasets available from the ucsc downloads section. the data is in the gz format. any suggestions on how to get it uploaded? ...
written 8.2 years ago by Keith Giles50 • updated 8.2 years ago by Daniel Blankenberg ♦♦ 1.7k

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