User: vaskin90

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vaskin9030
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3 years, 9 months ago
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3 years, 11 months ago
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Posts by vaskin90

<prev • 4 results • page 1 of 1 • next >
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Tutorial: How to set multiple parameters for a tool using the API
... This is just an FYI post, because documentations, comments and old forum posts gave me not up-to-date information. The old form that I found in documentations says that to set the parameters with the API, I should use the following form: params = {TOOL_ID_IN_GALAXY: {'param': 'param_name', 'value' ...
api tutorial written 3.9 years ago by vaskin9030
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Comment: C: How to get the name of the file (.dat) through the API?
... Thank you, John. Actually, I'd love to use datasets and it looks like, that dataset collection can help me. But since they are under development, I'd wait a while when they are well documented and stable. Breaking the workflow won't solve the case, since the multiple datasets still have to be pass ...
written 3.9 years ago by vaskin9030
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How to get the name of the file (.dat) through the API?
... I'm trying to use Galaxy for the NGS analysis. I'm running it on a server, so I don't use/need the GUI. I need to do merging of multiple files (actually it is merging of BAM). So I need to run the workflow with multiple inputs (I don't know the number in advance). Ok, there are steps, but using them ...
api ngs written 3.9 years ago by vaskin9030 • updated 3.9 years ago by jmchilton1.0k
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How to generate a Galaxy API key without the web-interface
... I need to setup Galaxy on a server for NGS analysis. The server is pretty closed and internal and I there is no HTTP server. I don't have root permissions as well. I'm going to control the Galaxy instance through API. But the problem is that I cannot generate an API key. How can I do it through the ...
galaxy api written 4.0 years ago by vaskin9030 • updated 3.9 years ago by jmchilton1.0k

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