User: Dan Blankenberg

gravatar for Dan Blankenberg
Reputation:
130
Status:
New User
Location:
Last seen:
11 years, 8 months ago
Joined:
12 years, 2 months ago
Email:
d*****@bx.psu.edu

Posts by Dan Blankenberg

<prev • 13 results • page 1 of 2 • next >
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Answer: A: Error Message When Importing Gc Content
... Ross, UCSC reports that this query is truncated, but the error message provided by Galaxy in these cases is pretty worthless. I have changed the error reported by Galaxy in this case to hopefully be more informative than just dashed lines. Let me know if you have another sugestion. The change is li ...
written 11.7 years ago by Dan Blankenberg130
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Answer: A: Fail To Load Galaxy: Test.G2.Bx.Psu
... Erika, thanks for the note. It should be working properly now :) Just for your information that first file is ~3.3gb. Let us know if there are any other issues. Dan ...
written 11.8 years ago by Dan Blankenberg130
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Answer: A: Data Imports Hang
... Ross, What OS/browser where you using at the time? It appears that Internet Explorer is having some flakey issues with the auto-refreshing - it wouldn't auto-refresh for me earlier (hung at 10 secs for me when it failed twice for me), but it seems to be working perfectly for me now. I'm not sure ...
written 11.8 years ago by Dan Blankenberg130
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Comment: C: Galaxy2.2 Not Accessible
... Should work now. There was an instance of BaseML running (long time) which was keeping the server from stopping (unbind from port) and restarting properly (bind to port). Killed BaseML and both instances of main, restarted. Should be good now. Dan ...
written 11.8 years ago by Dan Blankenberg130
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Answer: A: Problems Installing Galaxy Under Cygwin
... Iris, First off, thanks for your detailed message. As it turns out, a new version of Cygwin (1.5.21) was released, which required a new set of eggs to be created. I have added these eggs to the repository. If you do an "svn up" these eggs should be downloaded for you. Please let me know if this ...
written 11.8 years ago by Dan Blankenberg130
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Comment: C: Problem With Gmaj
... This sounds like the correct solution, and I cannot think of any tools which would be broken by doing this. Dan ...
written 11.8 years ago by Dan Blankenberg130
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Answer: A: Retrieving Dna Sequences
... Laura, The test browser has had some display changes recently: The display, edit, and delete links have been replaced with icons (eye, pencil, 'x'), located directly to right of the history item's title. The save link should still be displayed for types that support saving. I was able to access t ...
written 11.9 years ago by Dan Blankenberg130
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Answer: A: Windows Xp Instalation Problem
... Reymon, The error is due to the fact that required libraries are not in your path. The libraries are provided with the SVN downloads. There is a shell script provided, run.sh, which will load the appropriate paths for you. Try: sh run.sh Let us know if we can help with any thing else, Dan ...
written 11.9 years ago by Dan Blankenberg130
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Answer: A: Some Questions
... Iris, Thanks for your interest. Galaxy will run under Windows if you have Cygwin (http://www.cygwin.com/) installed. You will need make sure you have the latest version of Galaxy from SVN. Files are saved under "database/files/". There is no maximum file size in Galaxy, although certain filesys ...
written 11.9 years ago by Dan Blankenberg130
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Test Server Updated
... This is just a quick note to let you know that version 2.2 has been pushed up to test.g2.bx.psu.edu. Your old data is not lost, but is available temporarily at g2.bx.psu.edu:8887. Please let me know of any errors encountered at test.g2.bx.psu.edu - depending on your browser, you may want to clear ...
written 12.1 years ago by Dan Blankenberg130

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