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Posts by jtamames
... Dear Jen Thank you for your response. When I run fastqc on my data, the format is "Sanger/Illumina 1.9". I am not getting any results both when loading the file specifying "fastqsanger" format or when autodetecting it. Best, Javier ...
... I am trying to classify a fastq read file with MetaPhIan2 When I run MetaPhIan2, the result is 100% unclassified. Then I transform the fastq to fasta, run MetaPhIan instead, and I get a right classification (100% Cyanobacteria). I assume that there is some problem with the fastq file but do not know ...
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