User: mlhoang3

gravatar for mlhoang3
mlhoang30
Reputation:
0
Status:
New User
Location:
United States
Last seen:
1 month, 3 weeks ago
Joined:
3 years, 7 months ago
Email:
m*******@gmail.com

Posts by mlhoang3

<prev • 3 results • page 1 of 1 • next >
0
votes
3
answers
160
views
3
answers
Answer: A: PEAR alternative for merging overlapping paired-end reads using Galaxy tools
... Thanks, here's the error: Fatal error: Exit code 1 () [FLASH] ERROR: Input files do not contain the same number of reads Trimming likely have slightly changed number R1 and R2. Will try merging before trimming. For PE merge, I'd like the highest quality of reads (as PEAR usually gives) in order to ...
written 7 weeks ago by mlhoang30
0
votes
3
answers
160
views
3
answers
Answer: A: PEAR alternative for merging overlapping paired-end reads using Galaxy tools
... Thanks, I tried FLASH but got an error message. Also tried fastq-join and got error also. My insert is 101 bp sequenced at 2x150 PE. Trimmed adapters, leaving ~100 bases of insert for R1 and ~ 100 bases for R2. Parameters used in FLASH was minimum overlap of 60 and max overlap of 100. Perhaps p ...
written 7 weeks ago by mlhoang30
0
votes
3
answers
160
views
3
answers
PEAR alternative for merging overlapping paired-end reads using Galaxy tools
... Hello! I typically use PEAR to merge my two overlapping paired-end reads for one high quality read (R1 and R2 completely overlap). However, Galaxy not longer has the PEAR tool. What would be a good alternative? ...
galaxy written 7 weeks ago by mlhoang30

Latest awards to mlhoang3

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 110 users visited in the last hour