User: mconerly

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mconerly0
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Posts by mconerly

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Comment: C: Duplicate row names error with EdgeR on FeatureCounts files
... Unfortunately that did not solve the problem. ...
written 9 days ago by mconerly0
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Comment: C: Duplicate row names error with EdgeR on FeatureCounts files
... Interesting - I had not noticed that. I'll try re-running with "GFF gene identifier gene_id On feature level" set to TRUE. I should also note that we are hosting our own internal (cloud-based) instance of Galaxy, so it is possible something is wrong in the installation. ...
written 9 days ago by mconerly0
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Duplicate row names error with EdgeR on FeatureCounts files
... Hi all, I created tabular count files using FeatureCounts with a GTF file (iGenomes, UCSC hg38) and BAM files from TopHat. The files look correct, but I am getting the following error: Fatal error: Exit code 1 () Warning message: In data.frame(sampleID = samplenames, factors) : ...
htseq featurecounts rna-seq written 12 days ago by mconerly0 • updated 9 days ago by Jennifer Hillman Jackson25k

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