User: Justine.POLLET

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Posts by Justine.POLLET

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Updating a local ToolShed repo failed because it don't find index data
... Hi, I try to put a tool which use index data in a local toolshed. Planemo test and planemo serve works but when I try to update the toolshed repo it doesn't work.I have some error in the tool_shed_webapp.log ``` galaxy.tools.data WARNING 2018-06-27 11:22:51,363 [p:25661,w:1,m:0] [uWSGIWorker1Core1] ...
planemo toolshed sample loc development written 3 months ago by Justine.POLLET0 • updated 3 months ago by Jennifer Hillman Jackson25k
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Comment: C: Problem with custom tool that uses bioperl modules in local Galaxy instance
... Hi, I have a local instance of galaxy and have a tool written in Perl using some module . I have the same problem as you however i put the requirement tag in my xml file and the dependencies is successfully installed . ...
written 4 months ago by Justine.POLLET0
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my tools don't locate module install by conda in mulled environement
... Hello, i have a local instance of galaxy and have some perl tools in it . I am constrain to precise the mulled environment ( create by conda ) PATH in my tools script, if not i have an error like : **Can't locate xxxx.pm in @INC (you may need to install the xxx::xxx module)** But i have to find ...
depenencies galaxy conda mulled perl written 4 months ago by Justine.POLLET0 • updated 4 months ago by n.goue50

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