User: pks71500

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pks7150020
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Posts by pks71500

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Slurm Drmaa configuration for Galaxy
... Thanks, Jennifer. I have followed the link and now Galaxy submits with a real user id, but drmaa fails with unknown error. #688f [ 54.59] * updating status of job: 2691203 t #688f [ 54.59] -> slurmdrmaa_job_update_status({job_id=2691203}) d #688f [ 54.59] * state = 0, sta ...
written 20 days ago by pks7150020
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Comment: A: Slurm Drmaa configuration for Galaxy
... I have updated job_conf.xml file and I can now see that Galaxy tries to submit a job. But, it fails with Invalid user id. /usr/local/lib/libdrmaa.so ...
written 7 weeks ago by pks7150020
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Slurm Drmaa configuration for Galaxy
... Hello, I have followed the below links to configure Slurm for Galaxy. https://biostar.usegalaxy.org/p/19543/ http://gmod.827538.n3.nabble.com/Running-Galaxy-on-a-cluster-with-SLURM-td4051302.html I can successfully submit a job through slurm-drmaa or python-drmaa, but not from Galaxy. Galaxy only ...
drmaa slurm written 7 weeks ago by pks7150020
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Comment: C: Using PAM authentication
... Thanks Jennifer, The training link resolved my problem. ...
written 8 weeks ago by pks7150020
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Using PAM authentication
... Hello I am working on building our own Galaxy in house. I run run.sh and I was able to see the Galaxy page. I was wondering how I can use Linux user and their password. I saw config/auth_conf.xml.sample for ldap and AD ,but I am familiar with the setting. Could anyone help me to use linux users ...
pam written 8 weeks ago by pks7150020
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Changing file_path to user's home directory
... Hello, I am new to Galaxy and want to change the "file_path: database/files" in galaxy.yml to user's home directory. I think if I could use the userid as a variable I can set something like /home/< userid >/files, but I am not sure how to set it. Could you anyone help me how to set the user' ...
file_path galaxy.yml galaxy config admin written 5 months ago by pks7150020 • updated 5 months ago by Jennifer Hillman Jackson25k

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