User: v4savaishnavi

gravatar for v4savaishnavi
Reputation:
30
Status:
New User
Location:
Last seen:
4 months, 3 weeks ago
Joined:
5 months, 1 week ago
Email:
v************@gmail.com

Posts by v4savaishnavi

<prev • 4 results • page 1 of 1 • next >
0
votes
1
answer
389
views
1
answer
how to give Snpeff inputs (Non-coding and regulatory annotation)
... Hi, I am trying to annotate variants among Solanum lycopersicum leaf curl mutants using SnpEff eff. But I am not able to give inputs that is; non coding and regulatory annotation. Please provide any guidance to me regarding this query. Thanks in advance. ...
annotate galaxy vcf snp snpeff written 4 months ago by v4savaishnavi30 • updated 4 months ago by Jennifer Hillman Jackson25k
0
votes
0
answers
146
views
0
answers
(Closed) Variant calling query with Unified Genotyper (deprecated GATK tool)
... Hi, I am trying to do exome analysis for Single Nucleotide variants detection. I have a doubt on unified genotyper output specified below. Whether this output has any connection with variants. Does this output shows Variant calling information. Please help me regarding this query. Thanks in advanc ...
deprecated gatk exome unified genotyper written 5 months ago by v4savaishnavi30 • updated 5 months ago by Jennifer Hillman Jackson25k
1
vote
2
answers
412
views
2
answers
Comment: A: Server queue problem
... I am also facing this problem. Does this issue stay for a long time? ...
written 5 months ago by v4savaishnavi30
2
votes
1
answer
258
views
1
answer
Snpeff build error
... Hi, I am trying to do exome analysis among Solanum lycopersicum leaf curl mutants. I have followed exome analysis pipeline using Varscan in galaxy and obtained a VCF file. For doing annotation I need to build a Snpeff database for that I have uploaded an annotation file with genbank format 'GCF_000 ...
build database software error snpeff written 5 months ago by v4savaishnavi30 • updated 5 months ago by Jennifer Hillman Jackson25k

Latest awards to v4savaishnavi

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 119 users visited in the last hour