User: mlwright

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mlwright10
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1 week, 2 days ago
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2 months, 3 weeks ago
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m*****************@gmail.com

Posts by mlwright

<prev • 8 results • page 1 of 1 • next >
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Comment: C: No space left on device error
... I'm experiencing the same problems lately. Really long wait times and the "No space left on device" error. ...
written 14 days ago by mlwright10
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Comment: C: Job not running
... I've also been noticing this today and yesterday ...
written 14 days ago by mlwright10
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Error while trying to filter files
... Hi, I am using the Galaxy Main server to try and filter an interval file by one of the columns, and most attempts have been failing with the error message: `slurmstepd: error: xcgroup_instantiate: unable to create cgroup '/sys/fs/cgroup/memory/slurm/uid_819800/job_14099233' : No space left on devi ...
software error written 14 days ago by mlwright10
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Comment: C: Is it possible to group many MAF files?
... Fantastic, thank you! ...
written 22 days ago by mlwright10
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Is it possible to group many MAF files?
... Hi, I have an interval file with ~100 sequences from hg38 that I am trying to extract multiple alignments from. Currently, I have 25 MAF files (Chr 1-22, X, Y, M) from hg38 uploaded, but when I Stitch MAF Blocks for one of my MAF files, I get a bunch of empty alignments for stuff on other chromosom ...
maf text-mani cat alignment merge written 22 days ago by mlwright10 • updated 22 days ago by Jennifer Hillman Jackson25k
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Error when trying to stitch MAF blocks
... Hi, I am trying to stitch multiple alignments from about 25 species in the 100-way multiZ MAF on usegalaxy.org. I am using an interval file with hg19 coordinates, lifted over from hg38 coordinates. I can successfully extract genomic coordinates with the same data, so I don't know if this is a probl ...
software error alignment written 5 weeks ago by mlwright10 • updated 5 weeks ago by Jennifer Hillman Jackson25k
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Answer: A: Stitch MAF Blocks output mostly empty
... Nevermind, I think I got it. Just had to upload the MAF file from UCSC rather than using the default MAF file. ...
written 12 weeks ago by mlwright10
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Stitch MAF Blocks output mostly empty
... Hi, I am trying to extract multiple alignments for a large number of zebrafish regions (~90,000) to 4 other fish species using Stitch MAF Blocks. I'm giving it an interval file containing the chromosome, start, stop, and strand (all from zebrafish assembly danRer7) for these regions, but the output ...
alignment written 12 weeks ago by mlwright10

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