User: Briony

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Briony0
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Posts by Briony

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Comment: C: Help removing part of a sequence
... It's part of a primer that the other sequences I'm comparing to don't have. So for a easier alignment, I would like to remove it. However the sequences I'm aligning to have the first 2 bases. So I need to remove bases 3-22. ...
written 8 days ago by Briony0
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Another way to collapse sequences
... Hi, Just trying to collapse my sequences down, however I noticed the Collapse Sequence feature only collapses sequences that have 100% homology. Is there a way to change this or is there another feature I could use to collapse sequences based on say 98% homology? Thank you for your help. ...
galaxy reads collapse written 8 days ago by Briony0 • updated 7 days ago by Jennifer Hillman Jackson24k
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Answer: A: Help removing part of a sequence
... Hi, Thanks for your suggestion Jen. That only trims the ends off sequences however. I am wanting to remove a small section in the middle of the whole sequence. Thanks ...
written 8 days ago by Briony0
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Help removing part of a sequence
... Hi, I am trying to trim out part of a sequence so I can align it better to a reference sequence. I can remove the unwanted sequence at the end of my read but not the sequence at the beginning. It starts from the second base in. If anyone had any ideas about how to remove parts of a sequence that wo ...
trimmomatic trimgalore galaxy trim clip written 9 days ago by Briony0

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