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Posts by Ismaelrymy
... Hi there! I am performing a quality check in a transcriptomic dataset before attempting a de-novo assembly. Duplication is high, as expected, but I did not expect this results in the k-mer graph: ![enter image description here] No sequence is overrepresented in FastQC, whereas this makes me th ...
... Hi there. I want to assemble a transcriptome with Trinity using reads that are both paired- and single-end. Due to memory issues I have to normalize the reads, but the normalization process in Trinity is not able to handle this kind of data. Is there any application in Galaxy that I can use to norm ...
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