User: k.panov

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k.panov0
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Posts by k.panov

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Comment: C: Unable to fetch the sequence from human genome using start/stop coordinates
... Thank you! I just found the problem which was (as you suggested) in the differences between chromosome naming in ensembl (just a number) and NCBI (chr+number) All the best Konstantin ...
written 3 months ago by k.panov0
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Unable to fetch the sequence from human genome using start/stop coordinates
... Hello, I am attempting to generate a FASTA from MACS2 generated summits bed file using Galaxy's workflow: "Create MEME-ChIP input FASTA file (500bp centered regions) from MACS2 summits.bed file". This MACS2 bed file was generated from bowtie2 alignment bam file. Homo_sapiens.GRCh38.dna.primary_ ...
mismatch chrom genome version bed written 3 months ago by k.panov0 • updated 3 months ago by Jennifer Hillman Jackson25k

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