User: cjroy

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cjroy0
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Posts by cjroy

<prev • 6 results • page 1 of 1 • next >
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Comment: C: Waiting for Pre.cluster in Mothur
... Perfect thanks Jen! ...
written 7 months ago by cjroy0
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Waiting for Pre.cluster in Mothur
... Hi all, being a new user I'm not sure how long Pre.cluster should run for. I have 27 amplicon sequenced samples and my Pre.cluster has been running since yesterday afternoon around 18 hours. Do I wait for it? or has this been running to long. Thank you ...
job states history executing walltime written 7 months ago by cjroy0 • updated 7 months ago by Jennifer Hillman Jackson25k
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Answer: A: Problem with Align.Seqs
... can you also analyze 18s MiSeq runs with this protocol? ...
written 7 months ago by cjroy0
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Answer: A: Problem with Align.Seqs
... Oh nuts Jen, I totally missed that. I am working on my own data with this SOP and skimmed right past that because my sample data was already imported. Sorry to bother you for something so easy to fix. Thank you for your help and immediate response!! much appreciated Julie ...
written 7 months ago by cjroy0
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Comment: A: Problem with Align.Seqs
... ok me again so I figured out that I need to upload my own silva fasta file. I cannot find this silva.v4.fasta file that this protocol 16S Microbial Analysis with Mothur is asking for. I uploaded the most recent release from the silva website but that does not seem to be working...unless i messed up ...
written 7 months ago by cjroy0
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Problem with Align.Seqs
... Hello I am trying to run my fasta output file from Unique.Seqs with Align.Seqs and I am trying to assign my Silva reference but all it says is no options available and the only reference template I can select is Cashed reference or your history. What might I be doing wrong? Thank you ...
custom galaxy genome alignment fasta written 7 months ago by cjroy0

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