User: a.walne

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a.walne40
Reputation:
40
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New User
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Last seen:
2 months, 2 weeks ago
Joined:
7 months, 1 week ago
Email:
a******@qmul.ac.uk

Posts by a.walne

<prev • 5 results • page 1 of 1 • next >
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Upload at usegalaxy.org producing Internal Server Error (500) directly or failing FTP transfer quota exceed. Service depot.galaxyproject.org also impacted. RESOLVED
... Is there a problem with the connection between FileZilla and galaxy? I ask because fastq.gz files I have been previously been able to upload are now not possible. Below is a copy of some of the dialog stating that disk quota is exceeded. Any suggestions will be helpful. Thank you Command: PAS ...
usegalaxy.org ftp upload depot.galaxyproject.org written 11 weeks ago by a.walne40 • updated 11 weeks ago by Jennifer Hillman Jackson25k
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Empty data result from Cufflinks
... Hi I am trying to run Cufflinks on some BAM files that I have generated using HISAT2 with uploaded reference and annotation files. I don't appear to be getting any data in the skipped transcripts tab as shown below. There was also an error message about wrong annotation file type so I followed the ...
hisat2 custom cufflinks gtf genome written 6 months ago by a.walne40 • updated 6 months ago by Jennifer Hillman Jackson25k
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how long are uploaded ftp files held
... Once files have been uploaded onto Galaxy how long are they available to be used? Or do they need to be re uploaded after a couple of days even though they are in a list when I go to get data upload ftp Thanks ...
galaxy staging usegalaxy.org ftp upload written 7 months ago by a.walne40 • updated 7 months ago by Jennifer Hillman Jackson25k
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RNA-star mapped.bam problems
... I'm trying to use RNA-star but keep getting the following error message "An error occurred setting the metadata for this dataset Set it manually or retry auto-detection" in the tab "RNA STAR on data 11, data 10, and others: mapped.bam" In this example data 10 is - ftp://ftp.ensembl.org/pub/release ...
error mapping metadata star rna-seq written 7 months ago by a.walne40 • updated 7 months ago by Jennifer Hillman Jackson25k
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How to upload files to a Galaxy server with FTP enabled
... Hi. I know this is a very basic question but I am new to all this. I have some RNAseq data as fastq files that I want to align and analyse. The file size is approx 16GB and when I try to upload it, I see the message use an ftp site. How do I do this? Any help is appreciated Thank you ...
galaxy ftp upload written 7 months ago by a.walne40 • updated 7 months ago by Jennifer Hillman Jackson25k

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