User: 17317822349

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1731782234910
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Posts by 17317822349

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Comment: C: inquiry about the analysis of a dominant mutant with GALAXY
... What i used to produce the plot is exactly the workflow : imported: CloudMap Hawaiian Variant Mapping with WGS and Variant Calling workflow ...
written 11 weeks ago by 1731782234910
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(Closed) inquiry about the analysis of a dominant mutant with GALAXY
... DearXXX, Dear sir/madam I am sorry to bother you. I have a question regarding GALAXY. We are cloning a dominant mutant. The rationale is to collect F2 wild type animals. Once we narrow down to a small region, we can sequence the whole region and identify the related mutation. However, when I use GA ...
galaxy written 12 weeks ago by 1731782234910
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Answer: A: how to get the file of N2 SNP filtered
... Thanks so much for your answer .Actually ,i had ever used an N2 reference and a list of Hawaiian SNPs ,and the question is that the maximum value of Y- axis is 0.7 ,less than 1,so that the curve graphs can not get its peak value ,and i cannot find the mutant region. As a result ,i need an Hawaiian ...
written 3 months ago by 1731782234910
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how to get the file of N2 SNP filtered
... Dear sir/madam: How do you do ? i want to find the mutant gene under the background of CB4856 SNP ,so i need both HA reference gennome file and the file of N2 SNP filtered and unfiltered ,right ? but ,i have trouble in geting them. in fact ,the experiment was executed in this way: P0 wi ...
wgs analysis written 3 months ago by 1731782234910
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(Closed) inquiry about the reference genome and SNPs
... Dear Sir/Madam: How do you do?I am a new user of Galaxy.And i have been exploring how to analyse the WGS result of a C.elegans mutant,looking forward to find the mutant gene. In fact,the mutant gene is under N2 backgroud ,and other gene is under both N2 and CB4856 background.So in my view ,i ha ...
wgs analysis written 3 months ago by 1731782234910 • updated 3 months ago by Jennifer Hillman Jackson25k
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Answer: A: Inquiry about the C.elegans Feb 2009 (WS200/ce7) reference genome - source UCSC/
... Thanks for your sincere help . It means a lot to me.And there are still some questions remain to me. Firstly,I thought WS220/ce10 refers to the genome of CB4856,but i am not sure . And i need the genome of N2 to be the reference genome in my analysis .So i wonder if the latest version of N2 genome ...
written 3 months ago by 1731782234910
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(Closed) inquiry about the reference genome
... When i wanted to analyse the result of the WGS for a c.elegans mutant ,i found that i do not know how to get N2 genome as the reference genome. if you can give me some advice , i will be very glad.Thanks very much. ...
custom reference genome wgs written 3 months ago by 1731782234910 • updated 3 months ago by Jennifer Hillman Jackson25k
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Answer: A: Inquiry about the C.elegans Feb 2009 (WS200/ce7) reference genome - source UCSC/
... Thanks you very much for your answer. It did help help me a lot. And if you can tell me how can i get N2 genome as the refference genome?Thanks again. ...
written 3 months ago by 1731782234910
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Inquiry about the C.elegans Feb 2009 (WS200/ce7) reference genome - source UCSC/Wormbase
... how to select the appropriate reference genome ?what does C.elegans Feb 2009(WS200/ce7)(ce7) mean? Looking forward to your reply.Thanks. ...
database genome source label written 3 months ago by 1731782234910
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Answer: A: the type of the file to be uploaded
... Thank you very much for your advice.And my problem have been sloved. The truth is that i have uploaded the wrong file.Thanks anyway. ...
written 3 months ago by 1731782234910

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