User: human

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GEO SRA fastq-dump with very low mapping rate (Galaxy)
... Dear Biostars, I am a quite unexperienced biologist doing a metaanalysis of RNA-seq/microarray expression data using Galaxy and I get very low mapping percentage (0.5-1.7 %) with one particular GEO dataset. I have tested 3 other Datasets and mapping with BWA (same parameters) works like a charm (80 ...
rna-seq alignment galaxy written 11 days ago by human0 • updated 10 days ago by Jennifer Hillman Jackson24k

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