User: xpna01t

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xpna01t0
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Posts by xpna01t

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Trouble sorting a BAM file
... Hi I have aligned reads to Brassica juncea genome 1.5 using HISAT2. Now i want to perform PCA analysis to check my replicates. For this i am sorting BAM files by chromosomal coordinates but I am getting error; SORT An error occurred setting the metadata for this dataset Set it manually or retry aut ...
samtools sort sortsam pca analysis written 16 days ago by xpna01t0 • updated 16 days ago by Jennifer Hillman Jackson24k
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Comment: C: Help with using the multiBam Summary tool - error message
... hi Devon I am also getting error with multibamsummary. Reference genome is brassica juncea 1.5. error: Fatal error: Exit code 1 () [bwHdrRead] There was an error while reading in the header! Traceback (most recent call last): File "/galaxy/main/deps/_conda/envs/mulled-v1-0fa290085c742a3ffee6a14 ...
written 16 days ago by xpna01t0
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Comment: C: samtool sort error in sorting BAM files by read name
... Sort by chromosomal coordinates is also showing error... it is showing error to set metadata, however size of output file is 0 bytes ...
written 17 days ago by xpna01t0

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