User: pravikumar

gravatar for pravikumar
pravikumar0
Reputation:
0
Status:
New User
Location:
Last seen:
2 months, 2 weeks ago
Joined:
6 months, 2 weeks ago
Email:
p*********@mmrx.org

Posts by pravikumar

<prev • 5 results • page 1 of 1 • next >
0
votes
1
answer
106
views
1
answer
merge collections into single list of dataset tool
... I am getting the following error Error executing tool: 'HistoryDatasetAssociation' object has no attribute 'get' Thanks for your help. ...
collection dataset operations rna-seq merge written 11 weeks ago by pravikumar0 • updated 11 weeks ago by Jennifer Hillman Jackson25k
0
votes
1
answer
159
views
1
answer
Query for inputting Hisat2 BAM with dataset collections for Stringtie analysis
... Hi, I have data set collections ( 3 biological replicates) that I could run on HiSAT2 and I have BAM files with dataset collection. I have tried multiple times with Stringtie and even with Cufflinks but my analysis files are always lined up for analysis and it never gets through. I do not get any e ...
quota hisat2 rna-seq job stringtie written 12 weeks ago by pravikumar0 • updated 12 weeks ago by Jennifer Hillman Jackson25k
0
votes
0
answers
96
views
0
answers
Comment: C: Stringtie analysis- data collection BAM files lined up for analysis but no progr
... The HiSAT2 generated data collection files do not show any error. So I can presume that the upstart files are good, am I correct ? ...
written 3 months ago by pravikumar0
0
votes
0
answers
96
views
0
answers
(Closed) Stringtie analysis- data collection BAM files lined up for analysis but no progress
... Hi , My files have been queued up for Stringtie analysis for more than 48 hours. I am not getting any error either. Can anyone help ? Thanks, Puja ...
galaxy usegalaxy.org gray job queue written 3 months ago by pravikumar0 • updated 3 months ago by Jennifer Hillman Jackson25k
0
votes
0
answers
234
views
0
answers
(Closed) How to add reference annotation in cufflinks
... how to add reference annotation in cufflink ? I am trying to put my Hisat2 output file in cufflink and i need to give mm9 as reference ...
reference gtf igenomes annotation rna-seq written 6 months ago by pravikumar0 • updated 6 months ago by Jennifer Hillman Jackson25k

Latest awards to pravikumar

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 108 users visited in the last hour