User: hopeserepa

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hopeserepa0
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Posts by hopeserepa

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Unicycler assembly on galaxy
... Hi I have a bacterial genome (illumina) which I have to assemble. On trimming the data with Trimmomatic, i get errors when I assemble with Unicycler. But when I assemble the data without trimming it gets assembled. Anyone know what might be wrong? Please assist. Hope ...
assembly galaxy software error unicycler bacteria written 3 months ago by hopeserepa0 • updated 3 months ago by Jennifer Hillman Jackson25k
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Comment: C: Unicycler bacterial genome assembly result visualization
... Thanks Jennifer, I have managed to view the graph using Bandage. I now have to calculate the genome coverage but the Unicycler stats does not indicate which/how many of the mapped reads were assembled. Hope I make sense, please assist? ...
written 3 months ago by hopeserepa0
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Answer: A: Unicycler bacterial genome assembly result visualization
... Thanks Jennifer, I have managed to view the graph using Bandage. I now have to calculate the genome coverage but the Unicycler stats does not indicate which/how many of the mapped reads were assembled. Hope I make sense, please assist? ...
written 3 months ago by hopeserepa0
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Unicycler bacterial genome assembly result visualization
... I have used Unicycler to assembly bacteriala genome, but I am unable to view the unicycler final assembly graph, please assist? ...
assembly genome visualization unicycler graph written 3 months ago by hopeserepa0

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