User: ramibalasubramanian

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Posts by ramibalasubramanian

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HISAT2 input to StringTie with converted GFF > GTF produces error message
... i tried stringtie by giving the hisat2 output, it was showing error. then i tried converting my refseq .gff to .gtf using gffread. after using gffread i got one output in .gtf format but nothing was written in the file. Help me with this ...
hisat2 stringtie gtf gff3 gff written 3 months ago by ramibalasubramanian0 • updated 3 months ago by Jennifer Hillman Jackson25k
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FASTQC for RNAseq
... i'm new to this RNAseq data analysis and im a learner. i took the RNA-seq of dengue virus when i checked for quality control my gc% was 47% and failed. i donno how to process this data. if anyone can help please suggest me some solutions ...
rna-seq qa fastqc gc fastq written 4 months ago by ramibalasubramanian0 • updated 4 months ago by Jennifer Hillman Jackson25k

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