User: jasonanthonywhite

Reputation:
0
Status:
New User
Location:
Last seen:
3 days, 22 hours ago
Joined:
4 weeks ago
Email:
j****************@gmail.com

Posts by jasonanthonywhite

<prev • 3 results • page 1 of 1 • next >
0
votes
0
answers
48
views
0
answers
(Closed) ChIP-Seq: MACS2 refinepeak
... Happy New Year Everyone!! I am reaching out to inquire about the use of the MACS2 refinepeak package. Looking through the Galaxy website and the MACS github, I have only been able to find this description, "It is an experimental utility that takes raw read alignments, refines peak summits and gives ...
chip-seq macs2 spp refinepeak written 18 days ago by jasonanthonywhite0
0
votes
1
answer
70
views
1
answers
Answer: A: ChIP-Seq: Galaxy to IGB Visualization
... Found the problem. I did not realize that the UCSC genomes were in the database/build drop down menu using different nomenclature than the other assembly sources. I was only looking for genomes that started with "homo sapien" but searching for hg19 or hg38 render additional options. Associating file ...
written 26 days ago by jasonanthonywhite0
0
votes
1
answer
70
views
1
answer
ChIP-Seq: Galaxy to IGB Visualization
... Hi All, When trying to view Galaxy generated BAM files (from MACS and/or Star) in IGB, it seems that the database/build associated with the BAM files (hg19 with mtDNA replaced with rCRS) is not recognized by IGB, so the BAM files load in to IGB showing custom genome as oppose to the one identified ...
chip-seq genome reference ibg galaxy written 27 days ago by jasonanthonywhite0

Latest awards to jasonanthonywhite

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 113 users visited in the last hour