User: Leila Kian

gravatar for Leila Kian
Leila Kian10
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10
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New User
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Last seen:
1 month, 2 weeks ago
Joined:
8 months ago
Email:
k*********@gmail.com

Posts by Leila Kian

<prev • 5 results • page 1 of 1 • next >
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(Closed) count and compare microRNA expression value in RNA-Seq data on Galaxy
... Hello, I have a question, I want to count and compare specific microRNA expression value in BAM alignment on Galaxy server, How do I that? thanks in advance ...
galaxy rna-seq mirna microrna count written 8 weeks ago by Leila Kian10 • updated 8 weeks ago by Jennifer Hillman Jackson25k
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Comment: C: finding the specific locus of the Bam file
... Hi I have edited the topic and question. yes, that question was what I mean. please don't it close ...
written 3 months ago by Leila Kian10
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Answer: A: Unable to select GTF file from history in featureCounts (Galaxy version 1.6.0.3)
... Hello you could upload GTF file directly again from Tools, get data part and then UCSC main table browser part, after that select every option you want and select GTF from output format and finally send a query to Galaxy. and now you can select GTF from feature-count tools ...
written 3 months ago by Leila Kian10
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How can I get the specific locus of the Bam file
... Hello everyone I want to find a specific locus from bam file on Galaxy, and indeed want to know where is that located, how I do that? thanks in advance ...
bam bedtools intersect galaxy rna-seq written 3 months ago by Leila Kian10
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How many should multiple alignment of tophat-out in Human RNA-seqs?
... Hi I'm checking my tophat output data and I would like to know the rate of this multiple alignments are acceptable or not whether is dependent this rate of multiple alignments to type of genome or not? this RNA-seqs have belonged to Human. Reads: Input : 36238973 Mappe ...
alignment tophat rna-seq written 8 months ago by Leila Kian10 • updated 8 months ago by Jennifer Hillman Jackson25k

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