User: Elaine Youngman

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Posts by Elaine Youngman

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Fetch Taxonomic Representation and Kraken
... Hello, I need to do a quick analysis of taxonomy for a small set of Illumina reads (~1200), and was planning to use "Fetch Taxonomic Representation." However, I see in previous threads that this tool has been hidden, with the intention of replacing it with Kraken. Kraken is not useable yet, as ther ...
metagenomics written 2.2 years ago by Elaine Youngman10
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Metadata Error When Using Megablast
... Hello, I am attempting to megablast a FASTA file containing ~45,000 records of 100nt each against the nt database using the Galaxy web interface. I am using a Galaxy-generated FASTA file produced from a groomed FASTQ file using the 'FASTQ to tabular' and 'Tabular to FASTA' tools. When I try to use ...
galaxy written 4.3 years ago by Elaine Youngman10 • updated 4.3 years ago by Jennifer Hillman Jackson25k

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