User: stephanie.major

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Posts by stephanie.major

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variable, low alignment rates with HISAT2
... Hello, I have some single end mouse RNA sequencing data that I would like to use galaxy to analyze. I originally attempted using TopHat for alignment and was getting pretty low alignment rates (30-40%) for all of my files. After reading on this forum and other places, I saw that HISAT2 should be us ...
rna-seq alignment hisat2 written 3 days ago by stephanie.major10 • updated 1 day ago by Jennifer Hillman Jackson23k

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