User: Malik, Shivani

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1 year, 8 months ago
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4 years, 8 months ago
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s************@ucsf.edu

Posts by Malik, Shivani

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Cuffdiff Output
... Hi, I have a question about interpreting the cuffdiff data and how to pick up significant genes. I have genes which show ~8 fold change between 2 conditions: eg from FPKM of 0.08 to 28 and yet they are not significant. Is there is threshold of FPKM below which Cuffdiff does not consider it an FPKM ...
cuffdiff rna-seq written 4.5 years ago by Malik, Shivani30 • updated 4.5 years ago by Ian Donaldson120
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Installing Tool In Galaxy On Cloud
... Hi All, I want to use Tophat2 on amazon cloud. I could not find it in the regular tools unlike the public server. Am I using the right version? I tried installing it through admin on cloud .Though I was able to make myself admin through cloudman instance , I could not see any admin panel on Galaxy ...
galaxy written 4.6 years ago by Malik, Shivani30 • updated 4.6 years ago by Dannon Baker270
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Install Tools From Toolshed
... HI, I am trying to install Deseq from the toolshed. I get the message:Repository installation is not possible due to an invalid Galaxy URL: None. You may need to enable cookies in your browser. I have enabled the cookies and tried both on Firefox and Chrome but could not get it to work. Can you help ...
galaxy written 4.7 years ago by Malik, Shivani30 • updated 4.7 years ago by Jennifer Hillman Jackson25k

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