User: las821

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las8210
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Comment: C: Can you use Galaxy Lift-over to convert ce10 genome coordinates to ce11?
... The chromosome naming is the same. Do you have any other suggestions? Also, when I try to convert a bed from the ce10 assembly to the ce11, it does not offer ce11 as a "convert to" option (I can only convert to other species or ce6) so before I spend a lot of time trying to find the problem in the f ...
written 5 weeks ago by las8210
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Can you use Galaxy Lift-over to convert ce10 genome coordinates to ce11?
... I am trying to convert wig (or bigwig) and bed (or bigbed) files from the UCSC ce11 (WBcel235) coordinates to the ce10 (WS220) coordinates. The input files were actually created using the WS241 assembly, which is not available on UCSC yet, but the chromosome coordinates are the same in WS241 and WBc ...
galaxy ce11 ce10 lift-over assembly written 5 weeks ago by las8210 • updated 5 weeks ago by Jennifer Hillman Jackson23k

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