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- 12 months ago
Posts by f.carlisle
... Hi Jen, Thanks for the suggestions. My analysis methods are identical, so it looks like a data mismatch may be the problem. ...
... I'd like to run DEXseq on my RNA-seq dataset to identify any potential differences in exon inclusion between samples. I used HISAT2 to generate BAM files of aligned reads, and then DEXseq-Count mode-prepare to generate an annotation GFF file. My reference genome for alignments was hg38, and I used t ...
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