User: franziska.froeb

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Posts by franziska.froeb

<prev • 5 results • page 1 of 1 • next >
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DiffBind differential binding analysis of ChIP-Seq peak data
... Hi, I am analysing ChIPseq data on Galaxy beginning with raw fastq files (fastqc, trimmer by column, bowtie2, RmDup, Filter, bamcoverage, merge bam files + bamcoverage of merged files, MACS2 peak calling) and ending up with nice bigwig and bed files for visualizing in IGV. In the end, the goal woul ...
chip-seq analysis diffbind written 10 weeks ago by franziska.froeb0 • updated 10 weeks ago by Jennifer Hillman Jackson25k
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Error from trimmed fastq file to bam file via bowtie2
... Hello everyone, I did ChIPseq analyses a couple of times and it always worked quite nicely. So, now I have the problem that I have fastq files (size 700-1000MB) which I can trim at first without any problems, but after bowtie2 the error message below occurs and my file is below 1KB?! > Error ...
content datatype bowtie qa fastq written 7 months ago by franziska.froeb0 • updated 7 months ago by Jennifer Hillman Jackson25k
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Comment: C: Error in my storage quota
... Hi Jen, thank you so much for your help! I just did the first thing you recommended and it worked perfectly! Thanks again! ...
written 7 months ago by franziska.froeb0
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Comment: A: Error in my storage quota
... I am also not able to connect Filezilla with my account to upload new data with this ftp client...Please help me! ...
written 7 months ago by franziska.froeb0
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Error in my storage quota
... Hello, I have a problem in my storage quota. It shows that I'm using 75% of the storage, but my current history is empty and I deleted permanently all my previous histories. Any idea how to solve this issue? Thanks, Franzi ...
quota usegalaxy.org ftp upload account written 7 months ago by franziska.froeb0 • updated 7 months ago by Jennifer Hillman Jackson25k

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