User: apeiravan

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apeiravan0
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Posts by apeiravan

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Does Unified Genotyper use any minimum and/or maximum read depth to call variants?
... Hi I am using GATK beta, and calling SNPs with Unified Genotyper (Unified Genotyper SNP and indel caller (Galaxy Version 0.0.6)) followed by variant recalibration. I did not see any minimum depth filter recommended in the GATK best practices, but it seems like i should be filtering for depth after ...
snp written 4 months ago by apeiravan0
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(Closed) getting Error message for any action taken even deleting files
... hi all, i have worked with galaxy last 2weeks. since this morning it has been so slow even refreshing a history and what ever i want to do even deleting a file it give me an error message, "An error occurred while updating information with the server. Please contact a Galaxy administrator if the pr ...
galaxy written 4 months ago by apeiravan0

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