User: Amalendu.Ghosh

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10
Status:
New User
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Last seen:
4 months ago
Joined:
5 months, 3 weeks ago
Email:
A*************@fda.hhs.gov

Posts by Amalendu.Ghosh

<prev • 5 results • page 1 of 1 • next >
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Bowtie2 not working
... Bowtie2 was working with my reads previously, but its stooped working since last few days. any idea? please let me know? ...
bowtie written 5 months ago by Amalendu.Ghosh10 • updated 5 months ago by Jennifer Hillman Jackson23k
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data limit of 250 gb
... is it possible to use more than 250 gb limit for short time to complete analysis of a dataset? ...
quota requests usegalaxy.org account written 5 months ago by Amalendu.Ghosh10 • updated 5 months ago by Jennifer Hillman Jackson23k
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Answer: A: how to merge multiple cufflink data in one file
... Hi Jen Thanks for following up! i used mm10 iGenomes GTF file with the tool along with the natively indexed mm10 genome/and mm10 genome uploaded by me which is actually came from igenome. the problem remains. can i send you the link so that you can see what is happening! thanks![enter li ...
written 5 months ago by Amalendu.Ghosh10
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Answer: A: how to merge multiple cufflink data in one file
... Firs of all Thank you Jennifer! yes i did alignment using in built mm10 genome and then did the cufflink using the igenome gtf file which i uploaded into the system. lets try to upload mm10 genome from i genome and use that as refference genome with HISAT. I am not using UCSC annotation file because ...
written 5 months ago by Amalendu.Ghosh10
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how to merge multiple cufflink data in one file
... how to merge multiple cufflink data in one file. what i am expecting is rows will represent gene name and column will represent the FPKM values. i tried cuffdiff too. and all the time i am getting error: Error: atal error: Matched on error [13:22:33] Loading reference annotation. [13:22:36] Inspecti ...
rna-seq written 5 months ago by Amalendu.Ghosh10

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