User: Ido M. Tamir

gravatar for Ido M. Tamir
Ido M. Tamir280
Reputation:
280
Status:
Trusted
Location:
Austria
Last seen:
1 year, 6 months ago
Joined:
9 years, 4 months ago
Email:
t****@imp.ac.at

Posts by Ido M. Tamir

<prev • 31 results • page 1 of 4 • next >
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Salmon tool error: libgomp.so.1 missing
... I started a salmon job on the main galaxy site and I got the error: Fatal error: Exit code 127 () salmon: error while loading shared libraries: libgomp.so.1: cannot open shared object file: No such file or directory ...
salmon written 18 months ago by Ido M. Tamir280 • updated 18 months ago by Jennifer Hillman Jackson25k
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Comment: C: Welcome to Galaxy Biostar
... But until they are closed you will constantly have year old posts at the top of the questions. This is also not useful. Maybe mark them with a new flag tentatively or just make the "Galaxy Community" user only put posts on the list that were generated after today.   ...
written 4.6 years ago by Ido M. Tamir280
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Answer: A: Welcome to Galaxy Biostar
... Would it be possible to mark all questions until now with some answer as accepted? Galaxy Community is resurrecting year old posts, and even newer ones were I think all answered but of course never accepted.   ...
written 4.6 years ago by Ido M. Tamir280
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Answer: A: Quality Report
... Please be more specific about which quality of what gets reported. Why do you think its important to reduce the difference between mean and median? best, ido ...
written 5.0 years ago by Ido M. Tamir280
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Answer: A: Problem With Bowtie
... the file looks good to me (illumina 1.8 because of the ?). I might have misunderstood the error message. If it comes from galaxy when you try to use this file, then you have not specified the correct file format to galaxy. You have to change its type to fastqsanger by clicking on the pencil. HTH, i ...
written 5.2 years ago by Ido M. Tamir280
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Answer: A: Problem With Bowtie
... You should add 10 lines from one of your files. Then its easier to understand the problem. best, ido ...
written 5.2 years ago by Ido M. Tamir280
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Answer: A: Question
... You could use the adaptor clip with e.g. a custom poly-A 'adaptor' its in FASTX-Toolkit for FASTQ data best, ido ...
written 5.3 years ago by Ido M. Tamir280
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Comment: C: Barcode Splitter Files Web Based
... Not all the files should be converted to datasets. It would be good if there is a restful API call for this saying "promote this output file to a dataset in the background". Then one could create HTML pages with many output files without cluttering the history and the user can herself decide which o ...
written 5.4 years ago by Ido M. Tamir280
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Comment: C: Barcode Splitter Files Web Based
... Is there now a better way to import files that are actually already in galaxy? Is there a trello card for this? It would save our users a lot of time and nerves to be able to do this. thank you very much, ido ...
written 5.4 years ago by Ido M. Tamir280
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Conditional In Compute Tool
... Hi, is it possible to do a conditional in the compute tool? something like: "a" if c1 == 4 else "b" or if c1 == 4 "a" else "b" or c1 == 4 ? "a" else "b" thank you very much, ido ...
written 6.0 years ago by Ido M. Tamir280

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