User: carey.lambert

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Posts by carey.lambert

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SnpEff eff regulation options
... SnpEff eff has started demanding Regulation options where it previously did not require anything to be entered in this box. I'm getting the message "Parameter regulation requires a value, but has no legal values defined.". What are the options to enter into this box? Thanks, Carey ...
index galaxy snp annotation snpeff written 5 weeks ago by carey.lambert0 • updated 5 weeks ago by Jennifer Hillman Jackson25k
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Comment: C: SnpEff error and problems downloading genome
... Thanks for the quick response and sorry for the delay in responding. I've re-run and sent the bug report. ...
written 16 months ago by carey.lambert0
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SnpEff error and problems downloading genome
... Running SnpEff generates the following error: Fatal error: Exit code 1 (Error) Picked up _JAVA_OPTIONS: -Djava.io.tmpdir=/galaxy-repl/main/jobdir/016/025/16025586/_galaxy_tmp -Xmx7680m -Xms256m java.lang.RuntimeException: java.io.FileNotFoundException: /cvmfs/main.galaxyproject.org/deps/snpEff/4.0/i ...
usegalaxy.org snp snpeff written 16 months ago by carey.lambert0 • updated 16 months ago by Jennifer Hillman Jackson25k

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