Moderator: Bjoern Gruening

gravatar for Bjoern Gruening
Bjoern Gruening4.6k
Reputation:
4,580
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Location:
Germany
Website:
https://github.com/bgr...
Twitter:
bjoerngruening
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Google Scholar Page
Last seen:
3 days, 16 hours ago
Joined:
3 years, 10 months ago
Email:
b**************@gmail.com

Posts by Bjoern Gruening

<prev • 670 results • page 1 of 67 • next >
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Comment: C: Obtaining a tools.yaml to create a new galaxy docker flavour
... pip install ephemeris should work. ...
written 3 days ago by Bjoern Gruening4.6k
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Comment: C: Interactive environment: Docker can't access Galaxy
... Is the IE Galaxy proxy running? Can you do an namp on 172.17.0.1? ...
written 7 days ago by Bjoern Gruening4.6k
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Answer: A: Bioconda for R-tool dependencies
... Hi, you could try to contribute your own conda package. We have written some documentation here: https://bioconda.github.io/contributing.html For normal cran R packages have a look at https://bioconda.github.io/guidelines.html#r-cran. Hope that gets you started! Cheers, Bjoern ...
written 7 days ago by Bjoern Gruening4.6k
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Comment: C: Obtaining a tools.yaml to create a new galaxy docker flavour
... Colin, the link I posted above produces a yaml for you already. ...
written 9 days ago by Bjoern Gruening4.6k
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Answer: A: Obtaining a tools.yaml to create a new galaxy docker flavour
... Hi Colin, just to be sure, you want to create a new Galaxy flavor (Docker image) based on-top of the RNA workbench or do you want to install all tools from the RNA workbench into a big Galaxy instance, independent of Docker? For your last question we have here a small script for you: https://gith ...
written 13 days ago by Bjoern Gruening4.6k
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Comment: C: docker galaxy apt-get update & upgrade error
... Sorry for being so late here. Just to give a little bit feedback, we need to fix to a special version of nginx, that ships with a special upload module. Due to the nature of nginx, we need to compile nginx to make this happen and ship everything from a PPA. ...
written 13 days ago by Bjoern Gruening4.6k
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Answer: A: toolshed repository - "This revision can be installed: False" - why?
... Hi Art! This indicates that no tool is in your repo. Next to shed_create you need to do shed_upload to really push your tool into the TS. Hope that helps, Bjoern ...
written 6 weeks ago by Bjoern Gruening4.6k
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Comment: C: DIAMOND on Galaxy
... Can you tell me the version of the tool you are using please? ...
written 7 weeks ago by Bjoern Gruening4.6k
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Comment: C: Proxy Error on importing files by FTP
... HI Guy, how many files do you have in this box? ...
written 12 weeks ago by Bjoern Gruening4.6k
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Answer: A: Persisting cron.hourly jobs with my Galaxy-docker-stable instance
... I just checked 16.10 and 17.01 and both do not have anything defined in `/etc/cron.hourly` and `/usr/local/sbin/`. Are you running a modified version? ...
written 3 months ago by Bjoern Gruening4.6k

Latest awards to Bjoern Gruening

Popular Question 6 weeks ago, created a question with more than 1,000 views. For Announcement: Galaxy Docker Images
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Adding admin users
Appreciated 6 months ago, created a post with more than 5 votes. For A: Deploying galaxy instances using docker
Scholar 6 months ago, created an answer that has been accepted. For A: Adding admin users
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Adding admin users
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: Galaxy via Docker?
Good Answer 9 months ago, created an answer that was upvoted at least 5 times. For A: Deploying galaxy instances using docker
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: Galaxy via Docker?
Appreciated 9 months ago, created a post with more than 5 votes. For A: Deploying galaxy instances using docker
Teacher 11 months ago, created an answer with at least 3 up-votes. For A: Creating Appropriate Tool Dependencies for Custom Tool in Galaxy
Scholar 11 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Teacher 12 months ago, created an answer with at least 3 up-votes. For A: Creating Appropriate Tool Dependencies for Custom Tool in Galaxy
Popular Question 13 months ago, created a question with more than 1,000 views. For Announcement: Galaxy Docker Images
Teacher 13 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Teacher 13 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Scholar 14 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Scholar 14 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Scholar 15 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Teacher 15 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Scholar 15 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Teacher 16 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Scholar 16 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Scholar 16 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Scholar 16 months ago, created an answer that has been accepted. For A: Difficulty with aaChanges

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