Moderator: Bjoern Gruening

gravatar for Bjoern Gruening
Bjoern Gruening4.5k
Reputation:
4,520
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Trusted
Location:
Germany
Website:
https://github.com/bgr...
Twitter:
bjoerngruening
Scholar ID:
Google Scholar Page
Last seen:
5 days, 7 hours ago
Joined:
3 years, 7 months ago
Email:
b**************@gmail.com

Posts by Bjoern Gruening

<prev • 662 results • page 1 of 67 • next >
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Answer: A: Persisting cron.hourly jobs with my Galaxy-docker-stable instance
... I just checked 16.10 and 17.01 and both do not have anything defined in `/etc/cron.hourly` and `/usr/local/sbin/`. Are you running a modified version? ...
written 28 days ago by Bjoern Gruening4.5k
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Answer: A: DIAMOND on Galaxy
... We have updated the Diamond wrapper last week and fixed hopefully all issues. Let me know if it does not work for you. ...
written 4 weeks ago by Bjoern Gruening4.5k
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Answer: A: SQL query for profiling Galaxy usage
... Hi, Galaxy has a handy report webapp: https://wiki.galaxyproject.org/Admin/UsageReports It's a small webapp which has implemented some nice statistics. Ciao, Bjoern ...
written 8 weeks ago by Bjoern Gruening4.5k
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Comment: C: This repository requires dependencies that cannot be installed through the Tool
... The name attribute in your is also not supported. You also might consider to put your dependency into [BioConda][1] and configure Galaxy to use [them][2] [1]: https://github.com/bioconda/bioconda-recipes [2]: https://docs.galaxyproject.org/en/master/admin/conda_faq.html ...
written 9 weeks ago by Bjoern Gruening4.5k
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Answer: A: small RNA-seq data analysis
... We have some training material about RNA-seq here, this might be a good start: http://galaxyproject.github.io/training-material/RNA-Seq/ ...
written 9 weeks ago by Bjoern Gruening4.5k
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Comment: C: small RNA-seq data analysis
... Are you using usegalaxy.org? ...
written 9 weeks ago by Bjoern Gruening4.5k
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Answer: A: bwa installation
... We have some documentation about installing tools via the UI here: https://new.galaxyproject.org/Admin/Tools/AddToolFromToolShedTutorial/ ...
written 9 weeks ago by Bjoern Gruening4.5k
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Comment: C: bwa installation
... What error did you get? ...
written 9 weeks ago by Bjoern Gruening4.5k
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Comment: C: Installing Tools from ToolShed? (some are slow some are missing dep.)
... can you try again, I have updated the zlib packages. ...
written 11 weeks ago by Bjoern Gruening4.5k
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Answer: A: Installing Tools from ToolShed? (some are slow some are missing dep.)
... This is probably due to a broken link, upstream has removed the zlib tarball. I have created an issue here and hopefully I can solve this tomorrow: https://github.com/galaxyproject/tools-iuc/issues/1100 ...
written 11 weeks ago by Bjoern Gruening4.5k

Latest awards to Bjoern Gruening

Teacher 3 months ago, created an answer with at least 3 up-votes. For A: Adding admin users
Teacher 3 months ago, created an answer with at least 3 up-votes. For A: Adding admin users
Scholar 3 months ago, created an answer that has been accepted. For A: Adding admin users
Appreciated 3 months ago, created a post with more than 5 votes. For A: Deploying galaxy instances using docker
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Galaxy via Docker?
Teacher 6 months ago, created an answer with at least 3 up-votes. For A: Galaxy via Docker?
Appreciated 6 months ago, created a post with more than 5 votes. For A: Deploying galaxy instances using docker
Good Answer 6 months ago, created an answer that was upvoted at least 5 times. For A: Deploying galaxy instances using docker
Teacher 8 months ago, created an answer with at least 3 up-votes. For A: Creating Appropriate Tool Dependencies for Custom Tool in Galaxy
Scholar 8 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
Teacher 9 months ago, created an answer with at least 3 up-votes. For A: Creating Appropriate Tool Dependencies for Custom Tool in Galaxy
Popular Question 10 months ago, created a question with more than 1,000 views. For Announcement: Galaxy Docker Images
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Teacher 10 months ago, created an answer with at least 3 up-votes. For A: ngs.plot on use galaxy.org
Scholar 11 months ago, created an answer that has been accepted. For A: ngs.plot on use galaxy.org
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Scholar 13 months ago, created an answer that has been accepted. For A: Difficulty with aaChanges
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