User: Koushik

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Koushik10
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Posts by Koushik

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Answer: A: Error in Cuffdiff analysis with reference genome build
... Thanks for your suggestions. I am not using the galaxy for my analysis. However I saw in my TOPHAT result, the overall mapping rate is pretty low, something around 40.2%. I couldn't understand what should I do to get the high mapping rate in my data. Thanks. ...
written 7 months ago by Koushik10
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Error in Cuffdiff analysis with reference genome build
... Hello All, I am using cuffdiff for my differential gene expression analysis. I am doing three comparison and trying to find out the DEG. Now after running cuffquant, the output file i,e "abundances.cxb" file I have used as a input file in the Cuffdiff. In cuffdiff I am getting the error "**cannot f ...
cuffdiff custom genome rna-seq error written 7 months ago by Koushik10

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