User: georgess.dan

gravatar for georgess.dan
georgess.dan40
Reputation:
40
Status:
Trusted
Location:
Last seen:
7 months, 3 weeks ago
Joined:
8 months, 2 weeks ago
Email:
g***********@gmail.com

Posts by georgess.dan

<prev • 14 results • page 1 of 2 • next >
0
votes
1
answer
227
views
1
answers
Comment: A: Trimmomatic Error Message
... Hi Jen, As usual, thank you for your prompt reply. I read the information in the links you attached and curated all files names and attributes but the outcome was still the same (see error below). I think either there is something else that I'm doing wrong (and usually algorithms do not run if you ...
written 7 months ago by georgess.dan40
0
votes
1
answer
227
views
1
answer
Trimmomatic Error Message
... Hello, Part of my Galaxy Workflow is to have Trimmomatic trim a FASTQsanger and to convert the output into a FASTQ.gz. Somewhere in the process, Trimmomatic gives the error pasted below. Does anyone know what this means? Is it not able to compress the output into fastq.gz? Thanks, Dan --------- ...
fastq.gz trimmomatic fastqsanger fastq written 7 months ago by georgess.dan40
1
vote
1
answer
222
views
1
answers
Answer: A: Quota limit reached... but not really
... The problem is now solved: I had to go to https://usegalaxy.org/history/list, click 'Advanced Search', then 'status: all', and then ensure every history says 'deleted permanently'. ...
written 8 months ago by georgess.dan40
0
votes
2
answers
230
views
2
answers
Answer: A: How to Intersect Replicates in ChIPseq workflow
... Hi Mo, Thanks for tutorial. It looks super helpful. I'm not sure how to create a multi-file node. The Multiple Intersect function in BEDTools only has 2 input slots (1 for "Genome file" and 1 for BED file) and allows for one input file per slot. Thanks, Dan ...
written 8 months ago by georgess.dan40
0
votes
2
answers
208
views
2
answers
Answer: A: Deletion of data to free space is not working
... If there is nothing that can be done about this bug, would you mind deleting my account so I can create a new one and start from a clean slate? Thanks, Dan ...
written 8 months ago by georgess.dan40
0
votes
2
answers
208
views
2
answers
Comment: C: Deletion of data to free space is not working
... I have purged everything and anything. I am now down to "empty" on actual data, but Galaxy still showing "100% usage" and "warning you have used all your quota..." ...
written 8 months ago by georgess.dan40
0
votes
2
answers
208
views
2
answers
Comment: C: Deletion of data to free space is not working
... Logging out and back in did not solve this problem for me. Any heko would be appreciated! Thanks! Dan ...
written 8 months ago by georgess.dan40
0
votes
2
answers
230
views
2
answers
How to Intersect Replicates in ChIPseq workflow
... Hello, I have some ChIPseq data but I do not know how to write/use code so I am trying to build a workflow on UseGalaxy.org to analyze Treatment-vs-Control in 3 biological replicates sequenced on Illumina. Based on some of the online forums, I need to "intersect" (and not "merge") the data between ...
bedtools intersect chipseq macs worfflow written 8 months ago by georgess.dan40
0
votes
1
answer
240
views
1
answer
Forum: (Closed) Multiple Intersect in ChIPseq analysis
... Hello, I have some ChIPseq data but I do not know how to write/use code so I am trying to build a workflow on UseGalaxy.org to analyze Treatment-vs-Control in 3 biological replicates sequenced on Illumina. Based on some of the online forums, I need to "intersect" (and not "merge") the data between ...
chip-seq bedtools macs forum multipleinstersect written 8 months ago by georgess.dan40 • updated 5 months ago by linying91140
1
vote
1
answer
222
views
1
answer
Quota limit reached... but not really
... Hi, Galaxy is currently displaying: "You are over your disk quota. Tool execution is on hold until your disk usage drops below your allocated quota." and "Using 100%" (upper left). However, I only have 27.02 GB of data online. Anyone knows how to fix this? Thanks, Dan ...
quota data galaxy history written 8 months ago by georgess.dan40

Latest awards to georgess.dan

Scholar 8 months ago, created an answer that has been accepted. For A: FTP upload low speed

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 101 users visited in the last hour