User: jgbaumann

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jgbaumann10
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Switzerland
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4 months, 2 weeks ago
Joined:
10 months ago
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Posts by jgbaumann

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Enabling "GATK Advanced Options" on a tool impacts the run
... Hello Everyone, I'm dealing with a new situation. Let's imagine I want to use the Indel Realigner from GATK on Galaxy. Thing is, with my BAM file, I must enable the "-fixMisencodedQuals / --fix_misencoded_quality_scores" option in order no to make the run crash. This option is reachable by enablin ...
options galaxy gatk indel realigner written 4 months ago by jgbaumann10 • updated 4 months ago by Jennifer Hillman Jackson23k

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