User: david.roquis

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david.roquis30
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1 year, 2 months ago
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Posts by david.roquis

<prev • 18 results • page 2 of 2 • next >
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Comment: C: Batch workflow with two different inputs each time?
... Thanks! For some reason, Collection Operations tools where not present in my tool menu, but the problem is now fixed! Sincerely David ...
written 13 months ago by david.roquis30
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Comment: C: Batch workflow with two different inputs each time?
... Hello again! I have been trying to follow your suggestion to build my workflow, but I am blocking at some point. As you explained, I have created a list of of paired datasets, with one "mate" being the vcf file and the other one being the corresponding fastq file. However, while building my workflo ...
written 13 months ago by david.roquis30
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Comment: C: Batch workflow with two different inputs each time?
... Hi, Thanks for this very detailed answer and this workaround! I will give it a try and keep it updated here! Sincerely David ...
written 13 months ago by david.roquis30
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Comment: C: Batch workflow with two different inputs each time?
... Hi Jen and Galaxy Team, Thank you for your very quick answer. I am a biologist with some IT skills, but not really at scripting. It is a reason why I went for Galaxy, as the pipeline scripts left by our previous bioinformatician were not really flexible. I'll ask a friend to see if he can help me w ...
written 13 months ago by david.roquis30
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Batch workflow with two different inputs each time?
... Dear Galaxy Community, I have actually installed Galaxy on our cluster, and I am now trying to design a workflow to process our data. However, I am facing a "technical" issue and would like to have your suggestions on how I could solve it. I have around 1,200 Fastq bs-seq datasets, which I want to ...
batch galaxy alignment workflow multiple inputs written 13 months ago by david.roquis30 • updated 13 months ago by jmchilton1.1k
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Answer: A: Upload/Downloads fail when serving galaxy from a subdirectory
... Thanks a lot! It works perfectly now! ...
written 13 months ago by david.roquis30
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Answer: A: Upload/Downloads fail when serving galaxy from a subdirectory
... No idea anyone? I have still be trying but can't figure out how to solve this problem. ...
written 14 months ago by david.roquis30
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Upload/Downloads fail when serving galaxy from a subdirectory
... Hello everyone, I am setting up a Galaxy (v17.01 jan2017) production server on our cluster (I am still in the early steps of doing that). I am using NGINX (v1.10.1, manually compiled with upload module) as a proxy server. Both uploads and downloads are managed by NGINX. I serve with no subdirectory ...
galaxy written 15 months ago by david.roquis30

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