User: kmurph55

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kmurph550
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MAF to VCF showing Indels and snps
... Using Lastl I aligned a filtered fastq of mutant DNA to fasta of a reference chromosome. The alignment of the output is currently in a maf format and is EXTREMELY huge.... something like 35.7 GB. I would now like to generate a VCF file for indels and snps, but am not sure which tool is best for this ...
alignment samtools written 5 weeks ago by kmurph550 • updated 5 weeks ago by Jennifer Hillman Jackson21k

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