User: Els Willems

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Els Willems30
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30
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New User
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Last seen:
4 years, 7 months ago
Joined:
4 years, 9 months ago
Email:
e**********@biw.kuleuven.be

Posts by Els Willems

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Raw Counts From Galaxy
... Dear all, I would like to analyse some RNA-Seq I obtained in the chicken. I am implemented the Tophat-Cufflinks pipeline in Galaxy, but I would like to obtain a raw count of the number of mappings per transcript. I have not found a way to do this in Galaxy, is this possible? Thank you very much. ...
cufflinks rna-seq written 4.6 years ago by Els Willems30 • updated 4.6 years ago by Jennifer Hillman Jackson23k
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Raw Count Of Genes
... Dear all, I am a Phd student working on chicken genomics, with limited experience in the bio-informatics field. I performed an RNA-Seq experiment with single end 50 bp reads to find differential gene expressions between different groups. I have mapped this data with Tophat. Does anyone know how I c ...
cufflinks rna-seq written 4.7 years ago by Els Willems30 • updated 4.7 years ago by Björn Grüning350
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Depth Command In Sam Tools
... Dear all, I am a Phd student working on chicken genomics, with limited experience in the bio-informatics field. I performed an RNA-Seq experiment with single end 50 bp reads to find differential gene expressions between different groups. I have mapped this data with Tophat and used flagstat and Pic ...
bam samtools written 4.7 years ago by Els Willems30 • updated 4.7 years ago by Jennifer Hillman Jackson23k

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