User: sangramsahu15

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Posts by sangramsahu15

<prev • 4 results • page 1 of 1 • next >
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Comment: C: How to unzip the fastq files to be used in Tophat?
... Yes, now the problem is solved with Fastq Groomer. Thank you. But meanwhile another problem arose, Tophat job i start from the last two days and it is worth 500mb roughly. And it's still in the queue. Is there any problem with the server?? Please help me out in this issue. It's urget. Thank You, ...
written 6 months ago by sangramsahu150
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Comment: A: Tophat job not running
... Same with the case here also. My data were also showing some exclamatory sign after running the Tophat. Then after today morning it is showing "This job is waiting to run" from last more than 6-7 hours. It is roughly some 500mb only. It should not take that much time. So I guess there is some proble ...
written 6 months ago by sangramsahu150
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Comment: C: How to unzip the fastq files to be used in Tophat?
... Yes my file in fastq.gz format only. But from which option of "Convert Format" i can do this? I found all but nothing such fastq.gz to fastqsanger is there. ...
written 6 months ago by sangramsahu150
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How to unzip the fastq files to be used in Tophat?
... While I export RNAseq data from EBI SRA database. It came in xxx.fastq.qz format, which are not accepted by Tophat. I tried with FASTQ groomer. it also showing failed. How to solve this?? ...
galaxy tophat rna-seq written 6 months ago by sangramsahu150 • updated 6 months ago by jling60

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