User: sanathoi.guru

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Posts by sanathoi.guru

<prev • 7 results • page 1 of 1 • next >
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Comment: C: cufflink and tophat queueing more than 24hrs
... Hi A workflow was in queue for almost 40hrs. After deleting it, i created a new history(active) for tophat only, thinking it should work faster. ...
written 14 days ago by sanathoi.guru10
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Comment: C: Tophat taking too much time
... Hi Jen Its okay to close. I was just wondering why both the tools are queuing for long time..!! ...
written 14 days ago by sanathoi.guru10
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cufflink and tophat queueing more than 24hrs
... cufflink queue is not working. I have been trying to run tophat and cufflink since last 2 days, nothing change with the quote "This job is waiting to run". ...
cufflinks tophat written 15 days ago by sanathoi.guru10 • updated 15 days ago by Jennifer Hillman Jackson21k
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(Closed) Tophat taking too much time
... Is this a server error or data size overload?? Tophat is still running since long time. I got results in just few hours with the same dataset a week earlier.. ...
cufflinks tophat written 15 days ago by sanathoi.guru10
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htseq-count not working
... htseq-count is not working. Its been showing "!" since 48hrs. Anyone having similar problem like this??? ...
htseq-count galaxy rna-seq written 29 days ago by sanathoi.guru10 • updated 29 days ago by Jennifer Hillman Jackson21k
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Comment: C: FASTQC for RNA-Seq data in Galaxy
... so, if the data is used in RNA-Seq Analysis, Quality check or trimming is not required.. right?? ...
written 4 weeks ago by sanathoi.guru10
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FASTQC for RNA-Seq data in Galaxy
... Hello, I have 3 paired end fastaq file and when i loaded to Galaxy through EBI-SRA, it shows XXX.fastaq.gz, xxx 1.fastaq.gz and xxx 2.fastaq.gz. I was wondering what does the first file mean for (without number)??? 1. when i do FASTQC for this reads, the report shows some low quality. After TRIM ...
galaxy fastqc quality-check rna-seq written 4 weeks ago by sanathoi.guru10 • updated 4 weeks ago by Devon Ryan1.3k

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