User: sanathoi.guru

gravatar for sanathoi.guru
Reputation:
10
Status:
New User
Location:
Last seen:
6 months, 3 weeks ago
Joined:
8 months, 3 weeks ago
Email:
s************@gmail.com

Posts by sanathoi.guru

<prev • 8 results • page 1 of 1 • next >
0
votes
1
answer
153
views
1
answer
Pliz suggest some links or worth readings to clear the doubt
... Hi everyone, I have been using Galaxy server for DEG (tuxedo2) and am getting cuffdiff results with some unexpected features, specially c10. I am testing two datasets, one normal and another infected, 3 datasets each condition. normal infected OK 137.865 0 -inf - 5e-05 5.14778e-05 yes what doe ...
cuffdiff gene differential expression testing written 7 months ago by sanathoi.guru10 • updated 7 months ago by Devon Ryan1.7k
0
votes
1
answer
337
views
1
answers
Comment: C: cufflink and tophat queueing more than 24hrs
... Hi A workflow was in queue for almost 40hrs. After deleting it, i created a new history(active) for tophat only, thinking it should work faster. ...
written 8 months ago by sanathoi.guru10
0
votes
0
answers
250
views
0
answers
Comment: C: Tophat taking too much time
... Hi Jen Its okay to close. I was just wondering why both the tools are queuing for long time..!! ...
written 8 months ago by sanathoi.guru10
1
vote
1
answer
337
views
1
answer
cufflink and tophat queueing more than 24hrs
... cufflink queue is not working. I have been trying to run tophat and cufflink since last 2 days, nothing change with the quote "This job is waiting to run". ...
cufflinks tophat written 8 months ago by sanathoi.guru10 • updated 8 months ago by Jennifer Hillman Jackson23k
1
vote
0
answers
250
views
0
answers
(Closed) Tophat taking too much time
... Is this a server error or data size overload?? Tophat is still running since long time. I got results in just few hours with the same dataset a week earlier.. ...
cufflinks tophat written 8 months ago by sanathoi.guru10
0
votes
1
answer
257
views
1
answer
htseq-count not working
... htseq-count is not working. Its been showing "!" since 48hrs. Anyone having similar problem like this??? ...
htseq-count galaxy rna-seq written 8 months ago by sanathoi.guru10 • updated 8 months ago by Jennifer Hillman Jackson23k
0
votes
1
answer
390
views
1
answers
Comment: C: FASTQC for RNA-Seq data in Galaxy
... so, if the data is used in RNA-Seq Analysis, Quality check or trimming is not required.. right?? ...
written 8 months ago by sanathoi.guru10
0
votes
1
answer
390
views
1
answer
FASTQC for RNA-Seq data in Galaxy
... Hello, I have 3 paired end fastaq file and when i loaded to Galaxy through EBI-SRA, it shows XXX.fastaq.gz, xxx 1.fastaq.gz and xxx 2.fastaq.gz. I was wondering what does the first file mean for (without number)??? 1. when i do FASTQC for this reads, the report shows some low quality. After TRIM ...
galaxy fastqc quality-check rna-seq written 8 months ago by sanathoi.guru10 • updated 8 months ago by Devon Ryan1.7k

Latest awards to sanathoi.guru

No awards yet. Soon to come :-)

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 81 users visited in the last hour