User: valdirbarth

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valdirbarth10
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Posts by valdirbarth

<prev • 5 results • page 1 of 1 • next >
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biopython not installed?
... hi, I am using Ribo Tools in a local instance installed from the tool_shed (https://toolshed.g2.bx.psu.edu/repository?repository_id=f81548109cd9dd88). When i run it on my sample, it gives me the error: "line 16, in from Bio import SeqIO ImportError: No module named Bio" Which I googled and it ...
ribotools biopython written 14 hours ago by valdirbarth10
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Comment: A: not renaming dataset in workflow for Trim galore
... I still have not figured this out, anyone? ...
written 12 weeks ago by valdirbarth10
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Workflow renaming problem for tool with multiple outputs (Galaxy version 17.09) - Fix implemented at usegalaxy.org
... I have been successfully renaming outputs in my workflow. However I am having trouble renaming the outputs from Trim galore. I am using the usegalaxy.org server In the workflow section: > Rename dataset >This action will rename the output dataset. Click here > for more information. Vali ...
rename dataset galaxy workflow written 3 months ago by valdirbarth10 • updated 11 weeks ago by Jennifer Hillman Jackson24k
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Galaxy not PERMANENTLY deleting
... Hi, I just installed a new (Latest) galaxy in my Macbook and I realized that it is not permanently deleting the files from my hard drive (even though it says it was deleted, or even when I purge a whole history, the size of my galaxy folder stays the same when it should be 120 GB less). I had to man ...
deleting galaxy error written 3 months ago by valdirbarth10
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use bowtie for illumina with phred33?
... Hi, I am a newbie on this field. I am using usegalaxy.org tools, and bowtie for aligning sequences and for some reason the default that it uses is phred64 instead of phred33 (like the latest downloadable version of bowtie). The illumina seq files I get are phred33 and work perfectly in my local bowt ...
bowtie alignment rna-seq written 13 months ago by valdirbarth10 • updated 13 months ago by Jennifer Hillman Jackson24k

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