User: valdirbarth

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Posts by valdirbarth

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not renaming dataset in workflow for Trim galore
... On my workflow page, I do not seem to manage to automatically rename my file into something else after Trim Galore! is done with the trimming. The rename works well for all other tools, so I am not sure what is wrong with trim galore. rename dataset This action will rename the output dataset. Cli ...
galaxy written 2 hours ago by valdirbarth0
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Galaxy not PERMANENTLY deleting
... Hi, I just installed a new (Latest) galaxy in my Macbook and I realized that it is not permanently deleting the files from my hard drive (even though it says it was deleted, or even when I purge a whole history, the size of my galaxy folder stays the same when it should be 120 GB less). I had to man ...
deleting galaxy error written 2 hours ago by valdirbarth0
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use bowtie for illumina with phred33?
... Hi, I am a newbie on this field. I am using usegalaxy.org tools, and bowtie for aligning sequences and for some reason the default that it uses is phred64 instead of phred33 (like the latest downloadable version of bowtie). The illumina seq files I get are phred33 and work perfectly in my local bowt ...
bowtie alignment rna-seq written 10 months ago by valdirbarth0 • updated 10 months ago by Jennifer Hillman Jackson23k

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